About
The matchms skill enables mass spectrometry data processing for metabolomics workflows, allowing developers to import spectra from formats like mzML/MGF/MSP and calculate spectral similarities using cosine algorithms. It provides capabilities for metadata harmonization, peak filtering, and compound identification within reproducible analytical pipelines. Use this skill when building tools for MS data processing, spectral library matching, or metabolomics analysis in Python.
Quick Install
Claude Code
Recommendednpx skills add overtimepog/AgentTheo -a claude-code/plugin add https://github.com/overtimepog/AgentTheogit clone https://github.com/overtimepog/AgentTheo.git ~/.claude/skills/matchmsCopy and paste this command in Claude Code to install this skill
GitHub Repository
Frequently asked questions
What is the matchms skill?
matchms is a Claude Skill by overtimepog. Skills package instructions and resources that Claude loads on demand, so Claude can perform matchms-related tasks without extra prompting.
How do I install matchms?
Use the install commands on this page: add matchms to Claude Code as a plugin, or clone its repository into your skills directory, then restart Claude so it picks up the skill.
What category does matchms belong to?
matchms is in the Other category, tagged data.
Is matchms free to use?
Yes. matchms is listed on AIMCP and free to install. It runs inside Claude, so no separate service account is required to use the skill itself.
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