monarch-database
About
This skill queries the Monarch Initiative knowledge graph to find associations between diseases, genes, and phenotypes across multiple species. It integrates major biomedical sources like OMIM, HPO, and ClinVar for tasks like rare disease gene discovery and phenotype mapping. Use it when you need to perform cross-species analysis or look up Human Phenotype Ontology (HPO) terms within Claude.
Quick Install
Claude Code
Recommendednpx skills add K-Dense-AI/claude-scientific-skills -a claude-code/plugin add https://github.com/K-Dense-AI/claude-scientific-skillsgit clone https://github.com/K-Dense-AI/claude-scientific-skills.git ~/.claude/skills/monarch-databaseCopy and paste this command in Claude Code to install this skill
GitHub Repository
Frequently asked questions
What is the monarch-database skill?
monarch-database is a Claude Skill by K-Dense-AI. Skills package instructions and resources that Claude loads on demand, so Claude can perform monarch-database-related tasks without extra prompting.
How do I install monarch-database?
Use the install commands on this page: add monarch-database to Claude Code as a plugin, or clone its repository into your skills directory, then restart Claude so it picks up the skill.
What category does monarch-database belong to?
monarch-database is in the Other category, tagged data.
Is monarch-database free to use?
Yes. monarch-database is listed on AIMCP and free to install. It runs inside Claude, so no separate service account is required to use the skill itself.
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