synapse-mcp
支持OAuth2认证的Synapse生物医学数据访问MCP服务器. synapse-mcp is a Model Context Protocol (MCP) server maintained by susheel. It connects to MCP-compatible clients such as Claude Desktop, Cursor, Cline, and other agents that speak the protocol. It exposes 7 tools, including authenticate, get_oauth_url, get_entity, get_entity_annotations, get_entity_children, query_entities and query_table, that an agent can call directly. It is categorized under Data/Storage and Tool/Server.
什么是MCP
这是一个模型上下文协议服务器，通过RESTful API提供对Synapse生物医学数据实体（数据集、项目、文件）及其注释的访问，并支持OAuth2认证。
如何使用MCP
可通过pip或Docker安装服务器，然后在本地运行或部署到Fly.io等云服务。它提供CLI和API端点用于查询Synapse数据，同时支持直接认证和OAuth2流程。
MCP的用途
Synapse MCP服务器支持以编程方式访问存储在Synapse中的生物医学研究数据，包括查询数据集、表格和Croissant等多种格式的元数据。它便于与Claude等AI工具集成进行生物医学数据分析。
AIMCP authority
DR and traffic signal for the AIMCP public domain.
Frequently asked questions
What is the synapse-mcp MCP server?
synapse-mcp is a Model Context Protocol server from susheel. It lets MCP-compatible AI clients call its tools over a standard interface, so agents like Claude, Cursor, and Cline can use it without custom integration.
How do I connect synapse-mcp to my AI client?
Add synapse-mcp to your client's MCP configuration using the stdio or SSE connection shown in the usage examples on this page, then restart the client to load the server.
What tools does synapse-mcp provide?
synapse-mcp provides 7 tools: authenticate, get_oauth_url, get_entity, get_entity_annotations, get_entity_children, query_entities and query_table.
Is synapse-mcp free to use?
synapse-mcp is listed on AIMCP for free. Any API keys or accounts required by the underlying service are set by its provider.
Vernclaw Plugins for OpenClaw
Ready-to-use connectors for SEO data, social reading & content generation. Pay-as-you-go credits with audit logs.