nf-core_mcp
Servidor MCP para gestionar pipelines de nf-core. nf-core_mcp is a Model Context Protocol (MCP) server maintained by wjlim. It connects to MCP-compatible clients such as Claude Desktop, Cursor, Cline, and other agents that speak the protocol. It exposes 5 tools, including list-pipelines, get-pipeline-modules, search-pipelines, pipeline-config and pipeline-workflow, that an agent can call directly. It is categorized under Tool/Server and DevOps/Workflow.
¿Qué es este MCP?
Este servidor MCP está diseñado para gestionar y navegar por los repositorios de pipelines de nf-core, proporcionando herramientas para listar, buscar y acceder a configuraciones y flujos de trabajo de los pipelines.
Cómo usar este MCP
Instala mediante npm o Docker, clona los repositorios de nf-core en un espacio de trabajo y utiliza comandos comolist-pipelines, get-pipeline-modules y search-pipelines para interactuar con los pipelines.
Para qué se puede usar este MCP
Puede utilizarse para simplificar la gestión de pipelines de nf-core, permitiendo un acceso fácil a configuraciones, flujos de trabajo y módulos, además de facilitar la búsqueda en los archivos de los pipelines.
AIMCP authority
DR and traffic signal for the AIMCP public domain.
Frequently asked questions
What is the nf-core_mcp MCP server?
nf-core_mcp is a Model Context Protocol server from wjlim. It lets MCP-compatible AI clients call its tools over a standard interface, so agents like Claude, Cursor, and Cline can use it without custom integration.
How do I connect nf-core_mcp to my AI client?
Add nf-core_mcp to your client's MCP configuration using the stdio or SSE connection shown in the usage examples on this page, then restart the client to load the server.
What tools does nf-core_mcp provide?
nf-core_mcp provides 5 tools: list-pipelines, get-pipeline-modules, search-pipelines, pipeline-config and pipeline-workflow.
Is nf-core_mcp free to use?
nf-core_mcp is listed on AIMCP for free. Any API keys or accounts required by the underlying service are set by its provider.
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