nf-core_mcp
Serveur MCP pour gérer les pipelines nf-core. nf-core_mcp is a Model Context Protocol (MCP) server maintained by wjlim. It connects to MCP-compatible clients such as Claude Desktop, Cursor, Cline, and other agents that speak the protocol. It exposes 5 tools, including list-pipelines, get-pipeline-modules, search-pipelines, pipeline-config and pipeline-workflow, that an agent can call directly. It is categorized under Tool/Server and DevOps/Workflow.
Qu'est-ce que ce MCP
Ce serveur MCP est conçu pour gérer et naviguer dans les dépôts de pipelines nf-core, en fournissant des outils pour lister, rechercher et accéder aux configurations et workflows des pipelines.
Comment utiliser ce MCP
Installez via npm ou Docker, clonez les dépôts nf-core dans un espace de travail, et utilisez des commandes commelist-pipelines, get-pipeline-modules et search-pipelines pour interagir avec les pipelines.
À quoi ce MCP peut servir
Il peut être utilisé pour simplifier la gestion des pipelines nf-core, en permettant un accès facile aux configurations, workflows et modules, et en facilitant la recherche dans les fichiers des pipelines.
AIMCP authority
DR and traffic signal for the AIMCP public domain.
Frequently asked questions
What is the nf-core_mcp MCP server?
nf-core_mcp is a Model Context Protocol server from wjlim. It lets MCP-compatible AI clients call its tools over a standard interface, so agents like Claude, Cursor, and Cline can use it without custom integration.
How do I connect nf-core_mcp to my AI client?
Add nf-core_mcp to your client's MCP configuration using the stdio or SSE connection shown in the usage examples on this page, then restart the client to load the server.
What tools does nf-core_mcp provide?
nf-core_mcp provides 5 tools: list-pipelines, get-pipeline-modules, search-pipelines, pipeline-config and pipeline-workflow.
Is nf-core_mcp free to use?
nf-core_mcp is listed on AIMCP for free. Any API keys or accounts required by the underlying service are set by its provider.
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