nf-core_mcp

What is this MCP

This MCP server is designed to manage and navigate nf-core pipeline repositories, providing tools to list, search, and access pipeline configurations and workflows.

How to use this MCP

Install via npm or Docker, clone nf-core repositories into a workspace, and use commands like list-pipelines, get-pipeline-modules, and search-pipelines to interact with the pipelines.

What this MCP can be used for

It can be used to streamline the management of nf-core pipelines, enabling easy access to configurations, workflows, and modules, and facilitating search across pipeline files.