biomcp
Biomedical AI toolkit for specialized knowledge access. biomcp is a Model Context Protocol (MCP) server maintained by genomoncology. It connects to MCP-compatible clients such as Claude Desktop, Cursor, Cline, and other agents that speak the protocol. It exposes 9 tools, including article_searcher, article_details, trial_searcher, trial_protocol, trial_locations, trial_outcomes, trial_references and variant_searcher, that an agent can call directly. It is categorized under AI/Assistant, Healthcare/FHIR and Tool/CLI.
What is this MCP
BioMCP is a biomedical Model Context Protocol that connects AI systems to authoritative biomedical data sources like PubMed, ClinicalTrials.gov, and MyVariant.info, enabling precise biomedical queries.
How to use this MCP
Configure as an MCP server in Claude Desktop or use the Python package/CLI to directly query biomedical databases with natural language commands.
What this MCP can be used for
Enhancing AI assistants with specialized biomedical knowledge, supporting clinical research workflows, and enabling natural language access to clinical trials, literature, and genomic variant data.
AIMCP authority
DR and traffic signal for the AIMCP public domain.
Frequently asked questions
What is the biomcp MCP server?
biomcp is a Model Context Protocol server from genomoncology. It lets MCP-compatible AI clients call its tools over a standard interface, so agents like Claude, Cursor, and Cline can use it without custom integration.
How do I connect biomcp to my AI client?
Add biomcp to your client's MCP configuration using the stdio or SSE connection shown in the usage examples on this page, then restart the client to load the server.
What tools does biomcp provide?
biomcp provides 9 tools: article_searcher, article_details, trial_searcher, trial_protocol, trial_locations, trial_outcomes, trial_references, variant_searcher and variant_details.
Is biomcp free to use?
biomcp is listed on AIMCP for free. Any API keys or accounts required by the underlying service are set by its provider.
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