PubTator-MCP-Server

What is this MCP

This MCP provides programmatic access to PubTator3's biomedical literature annotation system, enabling AI models to search scientific literature, extract annotations, and analyze entity relationships.

How to use this MCP

The server can be installed via Smithery or manually, and supports both stdio and TCP transports. It offers API endpoints for literature export, entity lookup, relationship mining, and batch processing.

What this MCP can be used for

This MCP enables biomedical research automation, including literature mining, entity relationship analysis, and knowledge graph construction for AI assistants in healthcare/life sciences.