pysam
About
Pysam is a Python library for processing genomic data files like SAM/BAM alignments, VCF variants, and FASTA/FASTQ sequences. It provides a Pythonic interface to htslib for reading, writing, and querying genomic datasets in bioinformatics pipelines. Use it for tasks like region extraction, coverage calculation, and implementing NGS analysis workflows.
Quick Install
Claude Code
Recommendednpx skills add davila7/claude-code-templates -a claude-code/plugin add https://github.com/davila7/claude-code-templatesgit clone https://github.com/davila7/claude-code-templates.git ~/.claude/skills/pysamCopy and paste this command in Claude Code to install this skill
GitHub Repository
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