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implement-diffusion-network

pjt222
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About

This skill implements a core diffusion model (DDPM/score-based) with a U-Net, noise scheduler, and training/sampling loops, including DDIM acceleration. Use it to prototype custom generative models for images, audio, or molecules, or to implement research paper architectures. It's designed for custom modifications like novel conditioning before scaling with production frameworks.

Quick Install

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Documentation

Implement a Diffusion Network

Build denoising diffusion probabilistic model (DDPM) or score-based generative model from scratch. Forward noising process, U-Net denoiser, training objective, reverse sampling, accelerated inference via DDIM or DPM-Solver.

When Use

  • Build generative model for image, audio, molecular synthesis
  • Implement DDPM or score-based diffusion from research paper
  • Add custom noise schedule or conditioning mechanism to diffusion pipeline
  • Replace GAN-based generator with diffusion-based alternative
  • Prototype diffusion model before scaling to production with frameworks like diffusers

Inputs

  • Required: Training dataset (images, spectrograms, point clouds, other continuous data)
  • Required: Target resolution + number of channels
  • Required: Compute budget (GPU type + count, training time limit)
  • Optional: Noise schedule type (default: cosine)
  • Optional: Number of diffusion timesteps T (default: 1000)
  • Optional: Conditioning signal (class labels, text embeddings, other guidance)
  • Optional: Sampling acceleration method (default: DDIM with 50 steps)

Steps

Step 1: Define Forward Process (Noise Schedule)

Configure variance schedule controlling how data progressively noised.

  1. Define beta schedule (linear, cosine, learned):
import torch
import numpy as np

def cosine_beta_schedule(timesteps, s=0.008):
    """Cosine schedule from Nichol & Dhariwal (2021)."""
    steps = timesteps + 1
    t = torch.linspace(0, timesteps, steps) / timesteps
    alphas_cumprod = torch.cos((t + s) / (1 + s) * np.pi / 2) ** 2
    alphas_cumprod = alphas_cumprod / alphas_cumprod[0]
    betas = 1 - (alphas_cumprod[1:] / alphas_cumprod[:-1])
    return torch.clip(betas, 0.0001, 0.9999)

def linear_beta_schedule(timesteps, beta_start=1e-4, beta_end=0.02):
    """Original DDPM linear schedule."""
    return torch.linspace(beta_start, beta_end, timesteps)
  1. Pre-compute derived quantities used during training + sampling:
class DiffusionSchedule:
    def __init__(self, betas):
        self.betas = betas
        self.alphas = 1.0 - betas
        self.alphas_cumprod = torch.cumprod(self.alphas, dim=0)
        self.alphas_cumprod_prev = torch.cat([torch.tensor([1.0]), self.alphas_cumprod[:-1]])
        self.sqrt_alphas_cumprod = torch.sqrt(self.alphas_cumprod)
        self.sqrt_one_minus_alphas_cumprod = torch.sqrt(1.0 - self.alphas_cumprod)
        self.posterior_variance = (
            betas * (1.0 - self.alphas_cumprod_prev) / (1.0 - self.alphas_cumprod)
        )
  1. Implement forward noising function (q-sample):
    def q_sample(self, x_0, t, noise=None):
        """Add noise to x_0 at timestep t: q(x_t | x_0)."""
        if noise is None:
            noise = torch.randn_like(x_0)
        sqrt_alpha = self.sqrt_alphas_cumprod[t].reshape(-1, 1, 1, 1)
        sqrt_one_minus_alpha = self.sqrt_one_minus_alphas_cumprod[t].reshape(-1, 1, 1, 1)
        return sqrt_alpha * x_0 + sqrt_one_minus_alpha * noise
  1. Verify schedule visually:
schedule = DiffusionSchedule(cosine_beta_schedule(1000))
print(f"alpha_cumprod at t=0:   {schedule.alphas_cumprod[0]:.4f}")    # ~1.0 (clean)
print(f"alpha_cumprod at t=500: {schedule.alphas_cumprod[500]:.4f}")   # ~0.5 (half noise)
print(f"alpha_cumprod at t=999: {schedule.alphas_cumprod[999]:.4f}")   # ~0.0 (pure noise)

Got: alphas_cumprod decreases monotonically from near 1.0 to near 0.0. Cosine schedule decreases more gradually than linear in middle timesteps.

If fail: alphas_cumprod doesn't reach near zero at t=T? Model won't learn to generate from pure noise. Increase T or adjust schedule. Values go negative? Check clipping bounds on betas.

Step 2: Design Denoising Network Architecture

Build U-Net with time conditioning predicting noise given noisy input.

  1. Define time embedding module:
import torch.nn as nn
import math

class SinusoidalTimeEmbedding(nn.Module):
    def __init__(self, dim):
        super().__init__()
        self.dim = dim

    def forward(self, t):
        half_dim = self.dim // 2
        emb = math.log(10000) / (half_dim - 1)
        emb = torch.exp(torch.arange(half_dim, device=t.device) * -emb)
        emb = t[:, None].float() * emb[None, :]
        return torch.cat([emb.sin(), emb.cos()], dim=-1)
  1. Define residual block with time conditioning:
class ResBlock(nn.Module):
    def __init__(self, in_ch, out_ch, time_dim):
        super().__init__()
        self.conv1 = nn.Conv2d(in_ch, out_ch, 3, padding=1)
        self.conv2 = nn.Conv2d(out_ch, out_ch, 3, padding=1)
        self.time_mlp = nn.Linear(time_dim, out_ch)
        self.norm1 = nn.GroupNorm(8, out_ch)
        self.norm2 = nn.GroupNorm(8, out_ch)
        self.skip = nn.Conv2d(in_ch, out_ch, 1) if in_ch != out_ch else nn.Identity()

    def forward(self, x, t_emb):
        h = self.norm1(torch.nn.functional.silu(self.conv1(x)))
        h = h + self.time_mlp(torch.nn.functional.silu(t_emb))[:, :, None, None]
        h = self.norm2(torch.nn.functional.silu(self.conv2(h)))
        return h + self.skip(x)
  1. Assemble U-Net with encoder, bottleneck, decoder:
class UNet(nn.Module):
    def __init__(self, in_channels=3, base_channels=64, channel_mults=(1, 2, 4, 8)):
        super().__init__()
        time_dim = base_channels * 4
        self.time_embed = nn.Sequential(
            SinusoidalTimeEmbedding(base_channels),
            nn.Linear(base_channels, time_dim),
            nn.SiLU(),
            nn.Linear(time_dim, time_dim)
        )
        # Encoder, bottleneck, and decoder built from ResBlocks
        # with skip connections between encoder and decoder stages
        # (full implementation depends on resolution and channel config)
  1. Verify architecture accepts inputs of target resolution:
model = UNet(in_channels=3, base_channels=64)
x_test = torch.randn(2, 3, 64, 64)
t_test = torch.randint(0, 1000, (2,))
out = model(x_test, t_test)
assert out.shape == x_test.shape, f"Output shape {out.shape} != input shape {x_test.shape}"
print(f"Model parameters: {sum(p.numel() for p in model.parameters()):,}")

Got: Model outputs tensor same shape as input (predicting noise of matching dimensions). Parameter count proportional to resolution: approximately 30-60M for 64x64, 100-300M for 256x256.

If fail: Shape mismatches usually = incorrect downsampling/upsampling ratios. Verify each encoder stage halves spatial dimensions + each decoder stage doubles them. GroupNorm needs channels divisible by group count.

Step 3: Implement Training Loop

Train denoiser to predict noise added at each timestep.

  1. Set up training objective (simplified DDPM loss):
def training_loss(model, schedule, x_0):
    batch_size = x_0.shape[0]
    t = torch.randint(0, len(schedule.betas), (batch_size,), device=x_0.device)
    noise = torch.randn_like(x_0)
    x_t = schedule.q_sample(x_0, t, noise)
    predicted_noise = model(x_t, t)
    loss = torch.nn.functional.mse_loss(predicted_noise, noise)
    return loss
  1. Configure optimizer + learning rate schedule:
optimizer = torch.optim.AdamW(model.parameters(), lr=1e-4, weight_decay=0.01)
scheduler = torch.optim.lr_scheduler.CosineAnnealingLR(optimizer, T_max=100000)
  1. Run training loop with logging:
from torch.utils.data import DataLoader

dataloader = DataLoader(dataset, batch_size=64, shuffle=True, num_workers=4, pin_memory=True)

for epoch in range(num_epochs):
    model.train()
    epoch_loss = 0.0
    for batch_idx, x_0 in enumerate(dataloader):
        x_0 = x_0.to(device)
        loss = training_loss(model, schedule, x_0)
        optimizer.zero_grad()
        loss.backward()
        torch.nn.utils.clip_grad_norm_(model.parameters(), 1.0)
        optimizer.step()
        scheduler.step()
        epoch_loss += loss.item()
    avg_loss = epoch_loss / len(dataloader)
    print(f"Epoch {epoch}: loss={avg_loss:.4f}, lr={scheduler.get_last_lr()[0]:.6f}")
  1. Save checkpoints periodically:
    if (epoch + 1) % 10 == 0:
        torch.save({
            "epoch": epoch,
            "model_state": model.state_dict(),
            "optimizer_state": optimizer.state_dict(),
            "loss": avg_loss
        }, f"checkpoint_epoch_{epoch+1}.pt")

Got: Loss decreases steadily over training. For image data normalized to [-1, 1], initial loss near 1.0 (predicting random noise). After convergence, loss in range 0.01-0.10 depending on data complexity.

If fail: Loss plateaus early (> 0.5)? Check: (a) data normalization (must be [-1, 1] or [0, 1] with matching final activation), (b) learning rate (try 3e-4 or 5e-5), (c) gradient clipping (1.0 standard). Loss NaN? Reduce learning rate + check division by zero in schedule.

Step 4: Implement Sampling (Reverse Process)

Generate new samples by iteratively denoising from pure Gaussian noise.

  1. Implement standard DDPM sampling loop:
@torch.no_grad()
def ddpm_sample(model, schedule, shape, device):
    """Sample via the full DDPM reverse process (T steps)."""
    x = torch.randn(shape, device=device)
    T = len(schedule.betas)

    for t in reversed(range(T)):
        t_batch = torch.full((shape[0],), t, device=device, dtype=torch.long)
        predicted_noise = model(x, t_batch)

        alpha = schedule.alphas[t]
        alpha_cumprod = schedule.alphas_cumprod[t]
        beta = schedule.betas[t]

        mean = (1 / torch.sqrt(alpha)) * (
            x - (beta / torch.sqrt(1 - alpha_cumprod)) * predicted_noise
        )

        if t > 0:
            noise = torch.randn_like(x)
            sigma = torch.sqrt(schedule.posterior_variance[t])
            x = mean + sigma * noise
        else:
            x = mean

    return x
  1. Generate + visualize samples:
samples = ddpm_sample(model, schedule, shape=(16, 3, 64, 64), device=device)
samples = (samples.clamp(-1, 1) + 1) / 2  # rescale to [0, 1]

Got: Generated samples show recognizable structure (not pure noise or uniform color). At 64x64 resolution with 100K+ training steps, outputs should visually resemble training distribution.

If fail: Samples blurry? Train longer or increase model capacity. Samples noisy? Reverse process may have bug — verify schedule indexing matches training. All samples look identical? Check mode collapse (try different random seeds).

Step 5: Add Sampling Acceleration

Reduce number of sampling steps using DDIM or DPM-Solver.

  1. Implement DDIM sampling (deterministic, fewer steps):
@torch.no_grad()
def ddim_sample(model, schedule, shape, device, num_steps=50, eta=0.0):
    """DDIM sampling with configurable step count and stochasticity."""
    T = len(schedule.betas)
    step_indices = torch.linspace(0, T - 1, num_steps, dtype=torch.long)

    x = torch.randn(shape, device=device)

    for i in reversed(range(len(step_indices))):
        t = step_indices[i]
        t_batch = torch.full((shape[0],), t, device=device, dtype=torch.long)
        predicted_noise = model(x, t_batch)

        alpha_t = schedule.alphas_cumprod[t]
        alpha_prev = schedule.alphas_cumprod[step_indices[i - 1]] if i > 0 else torch.tensor(1.0)

        predicted_x0 = (x - torch.sqrt(1 - alpha_t) * predicted_noise) / torch.sqrt(alpha_t)
        predicted_x0 = predicted_x0.clamp(-1, 1)

        sigma = eta * torch.sqrt((1 - alpha_prev) / (1 - alpha_t) * (1 - alpha_t / alpha_prev))
        direction = torch.sqrt(1 - alpha_prev - sigma**2) * predicted_noise

        x = torch.sqrt(alpha_prev) * predicted_x0 + direction
        if i > 0 and eta > 0:
            x = x + sigma * torch.randn_like(x)

    return x
  1. Compare sample quality across step counts:
for n_steps in [10, 25, 50, 100, 250]:
    samples = ddim_sample(model, schedule, shape=(16, 3, 64, 64), device=device, num_steps=n_steps)
    print(f"DDIM {n_steps} steps: generated {samples.shape[0]} samples")
    # Save grid for visual comparison
  1. Benchmark sampling speed:
import time

for method, n_steps in [("DDPM", 1000), ("DDIM-50", 50), ("DDIM-25", 25)]:
    start = time.time()
    _ = ddim_sample(model, schedule, (1, 3, 64, 64), device, num_steps=n_steps if "DDIM" in method else 1000)
    elapsed = time.time() - start
    print(f"{method}: {elapsed:.2f}s per sample")

Got: DDIM with 50 steps produces samples visually comparable to DDPM with 1000 steps at 20x speed improvement. Quality degrades gracefully down to approximately 20-25 steps.

If fail: DDIM samples worse than DDPM at same step count? Verify alpha indexing. DDIM uses alphas_cumprod direct, not alphas. Samples at low step counts very noisy? Try eta=0.0 (fully deterministic) first.

Step 6: Evaluate Sample Quality

Quantify generation quality using standard metrics.

  1. Compute FID (Frechet Inception Distance):
from torchmetrics.image.fid import FrechetInceptionDistance

fid_metric = FrechetInceptionDistance(feature=2048, normalize=True)

# Add real images
for batch in real_dataloader:
    fid_metric.update(batch.to(device), real=True)

# Add generated images
n_generated = 0
while n_generated < 10000:
    samples = ddim_sample(model, schedule, (64, 3, 64, 64), device, num_steps=50)
    samples = ((samples.clamp(-1, 1) + 1) / 2 * 255).byte()
    fid_metric.update(samples, real=False)
    n_generated += samples.shape[0]

fid_score = fid_metric.compute()
print(f"FID: {fid_score:.2f}")
  1. Assess sample diversity (check mode collapse):
# Compute pairwise LPIPS distances among generated samples
from torchmetrics.image.lpip import LearnedPerceptualImagePatchSimilarity

lpips = LearnedPerceptualImagePatchSimilarity(net_type="alex")
n_pairs = 50
diversity_scores = []
for i in range(n_pairs):
    s1 = ddim_sample(model, schedule, (1, 3, 64, 64), device, num_steps=50)
    s2 = ddim_sample(model, schedule, (1, 3, 64, 64), device, num_steps=50)
    score = lpips(s1.clamp(-1, 1), s2.clamp(-1, 1))
    diversity_scores.append(score.item())
print(f"Mean pairwise LPIPS: {np.mean(diversity_scores):.4f} (higher = more diverse)")
  1. Log results:
results = {
    "fid": fid_score.item(),
    "mean_lpips_diversity": float(np.mean(diversity_scores)),
    "sampling_method": "DDIM-50",
    "training_epochs": num_epochs,
    "model_params": sum(p.numel() for p in model.parameters())
}
print("Evaluation results:", results)

Got: FID below 50 for well-trained model on standard benchmarks (CIFAR-10, CelebA). LPIPS diversity above 0.4 indicates no mode collapse. State-of-the-art models achieve FID 2-10 on CIFAR-10.

If fail: High FID (>100) indicates training issues or insufficient epochs. Low diversity (LPIPS < 0.2) suggests mode collapse — increase model capacity, check data augmentation, train longer. Compute FID on at least 10K samples for stable estimates.

Checks

  • Forward process produces pure noise at t=T (visual check + numeric: mean near 0, std near 1)
  • U-Net output shape matches input shape for all target resolutions
  • Training loss decreases monotonically over first 1000 steps
  • DDPM sampling produces recognizable outputs after sufficient training
  • DDIM with 50 steps produces quality comparable to DDPM with 1000 steps
  • FID score below 50 on target dataset (adjust threshold for domain)
  • Sample diversity (LPIPS) confirms no mode collapse
  • Checkpoints saved + loadable no errors

Pitfalls

  • Wrong data normalization: DDPM assumes data in [-1, 1]. Images in [0, 255] → loss enormous + training will diverge. Normalize before training + denormalize after sampling.
  • Schedule indexing off by one: Forward process uses alphas_cumprod[t] for noised sample at step t. Off-by-one errors in sampling (using t+1 or t-1) produce visibly degraded samples.
  • Forgetting gradient clipping: Without clip_grad_norm_(1.0), training unstable for large models. Especially critical in early epochs.
  • Too few sampling steps for DDIM: Below 20 steps, DDIM quality degrades rapid. Use at least 25 steps for acceptable results; 50 steps for near-DDPM quality.
  • Evaluating FID on too few samples: FID estimates biased with small sample sizes. Use at least 10,000 generated + 10,000 real images for stable FID computation.
  • Ignoring EMA: Exponential moving average of model weights significantly improves sample quality. Use decay rate of 0.9999 + sample from EMA model, not training model.

See Also

  • analyze-diffusion-dynamics - mathematical foundations of diffusion SDE that DDPM discretizes
  • fit-drift-diffusion-model - different application of diffusion processes to cognitive modeling
  • setup-gpu-training - configuring GPU environments for diffusion model training
  • containerize-application - packaging diffusion inference pipelines in Docker

GitHub Repository

pjt222/agent-almanac
Path: i18n/caveman/skills/implement-diffusion-network
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