SKILL·7071A1

bio-workflows-gwas-pipeline

GPTomics
Updated 1 month ago
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Testingaitestingautomation

About

This skill provides an end-to-end GWAS pipeline using PLINK2, handling quality control, population structure correction, and association testing. It's designed for developers running genome-wide association studies on case-control or quantitative traits from VCF files. The workflow includes defined checkpoints for sample quality, stratification bias, and association results validation.

Quick Install

Claude Code

Recommended
Primary
npx skills add GPTomics/bioSkills -a claude-code
Plugin CommandAlternative
/plugin add https://github.com/GPTomics/bioSkills
Git CloneAlternative
git clone https://github.com/GPTomics/bioSkills.git ~/.claude/skills/bio-workflows-gwas-pipeline

Copy and paste this command in Claude Code to install this skill

GitHub Repository

GPTomics/bioSkills
Path: workflows/gwas-pipeline
0
FAQ

Frequently asked questions

What is the bio-workflows-gwas-pipeline skill?

bio-workflows-gwas-pipeline is a Claude Skill by GPTomics. Skills package instructions and resources that Claude loads on demand, so Claude can perform bio-workflows-gwas-pipeline-related tasks without extra prompting.

How do I install bio-workflows-gwas-pipeline?

Use the install commands on this page: add bio-workflows-gwas-pipeline to Claude Code as a plugin, or clone its repository into your skills directory, then restart Claude so it picks up the skill.

What category does bio-workflows-gwas-pipeline belong to?

bio-workflows-gwas-pipeline is in the Testing category, tagged ai, testing and automation.

Is bio-workflows-gwas-pipeline free to use?

Yes. bio-workflows-gwas-pipeline is listed on AIMCP and free to install. It runs inside Claude, so no separate service account is required to use the skill itself.

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