bio-workflows-cytometry-pipeline
About
This skill provides an end-to-end R pipeline for processing flow and mass cytometry data from raw FCS files through to differential analysis. It orchestrates the complete workflow including compensation, transformation, gating/clustering, and statistical testing using CATALYST and diffcyt. Use this when you need a standardized, automated pipeline for cytometry data analysis.
Quick Install
Claude Code
Recommendednpx skills add majiayu000/claude-skill-registry -a claude-code/plugin add https://github.com/majiayu000/claude-skill-registrygit clone https://github.com/majiayu000/claude-skill-registry.git ~/.claude/skills/bio-workflows-cytometry-pipelineCopy and paste this command in Claude Code to install this skill
GitHub Repository
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