bio-spatial-transcriptomics-spatial-statistics
About
This skill computes spatial statistics for transcriptomics data using Squidpy, including Moran's I, Geary's C, and neighborhood enrichment analysis. Use it when you need to calculate spatial autocorrelation or co-occurrence statistics in spatial transcriptomics datasets. It provides ready-to-use Python patterns for identifying spatially variable features in biological data.
Quick Install
Claude Code
Recommendednpx skills add GPTomics/bioSkills -a claude-code/plugin add https://github.com/GPTomics/bioSkillsgit clone https://github.com/GPTomics/bioSkills.git ~/.claude/skills/bio-spatial-transcriptomics-spatial-statisticsCopy and paste this command in Claude Code to install this skill
GitHub Repository
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