bio-read-qc-quality-filtering
About
This skill filters sequencing reads by quality using Trimmomatic and fastp, applying sliding window trimming and removing low-quality bases from read ends. It discards reads that fall below thresholds for quality, length, or N content. Use it when reads have poor quality tails or require a minimum quality standard for downstream analysis.
Quick Install
Claude Code
Recommendednpx skills add GPTomics/bioSkills -a claude-code/plugin add https://github.com/GPTomics/bioSkillsgit clone https://github.com/GPTomics/bioSkills.git ~/.claude/skills/bio-read-qc-quality-filteringCopy and paste this command in Claude Code to install this skill
GitHub Repository
Frequently asked questions
What is the bio-read-qc-quality-filtering skill?
bio-read-qc-quality-filtering is a Claude Skill by GPTomics. Skills package instructions and resources that Claude loads on demand, so Claude can perform bio-read-qc-quality-filtering-related tasks without extra prompting.
How do I install bio-read-qc-quality-filtering?
Use the install commands on this page: add bio-read-qc-quality-filtering to Claude Code as a plugin, or clone its repository into your skills directory, then restart Claude so it picks up the skill.
What category does bio-read-qc-quality-filtering belong to?
bio-read-qc-quality-filtering is in the Design category, tagged ai and design.
Is bio-read-qc-quality-filtering free to use?
Yes. bio-read-qc-quality-filtering is listed on AIMCP and free to install. It runs inside Claude, so no separate service account is required to use the skill itself.
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