bio-single-cell-doublet-detection
About
This skill detects and removes doublets (multiple cells in one droplet) from single-cell RNA-seq data using Scrublet, DoubletFinder, and scDblFinder. It is an essential quality control step to prevent artificial cell populations before downstream analysis like clustering. Use it when you need to clean your scRNA-seq dataset by identifying and filtering out these technical artifacts.
Quick Install
Claude Code
Recommendednpx skills add GPTomics/bioSkills -a claude-code/plugin add https://github.com/GPTomics/bioSkillsgit clone https://github.com/GPTomics/bioSkills.git ~/.claude/skills/bio-single-cell-doublet-detectionCopy and paste this command in Claude Code to install this skill
GitHub Repository
Frequently asked questions
What is the bio-single-cell-doublet-detection skill?
bio-single-cell-doublet-detection is a Claude Skill by GPTomics. Skills package instructions and resources that Claude loads on demand, so Claude can perform bio-single-cell-doublet-detection-related tasks without extra prompting.
How do I install bio-single-cell-doublet-detection?
Use the install commands on this page: add bio-single-cell-doublet-detection to Claude Code as a plugin, or clone its repository into your skills directory, then restart Claude so it picks up the skill.
What category does bio-single-cell-doublet-detection belong to?
bio-single-cell-doublet-detection is in the Design category, tagged data.
Is bio-single-cell-doublet-detection free to use?
Yes. bio-single-cell-doublet-detection is listed on AIMCP and free to install. It runs inside Claude, so no separate service account is required to use the skill itself.
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