bio-genome-assembly-short-read-assembly
About
This skill provides de novo genome assembly from Illumina short reads using the SPAdes tool. It supports bacterial, fungal, small eukaryotic genomes, and includes specialized modes for metagenome and transcriptome assembly. Use it when you need to assemble genomes from Illumina paired-end reads via a CLI interface.
Quick Install
Claude Code
Recommendednpx skills add GPTomics/bioSkills -a claude-code/plugin add https://github.com/GPTomics/bioSkillsgit clone https://github.com/GPTomics/bioSkills.git ~/.claude/skills/bio-genome-assembly-short-read-assemblyCopy and paste this command in Claude Code to install this skill
GitHub Repository
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