SKILL·9CDA92

cdr3clustering

majiayu000
Updated 2 months ago
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Otheraidata

About

This skill clusters TCR/BCR clones by CDR3 sequences using GIANA or ClusTCR algorithms, adding a `CDR3_Cluster` column to metadata for clonotype analysis. It's designed for analyzing sequence convergence and public clonotypes across samples when VDJ data is present. Use it after ScRepCombiningExpression for integrated analysis or before TESSA for epitope specificity investigations.

Quick Install

Claude Code

Recommended
Primary
npx skills add majiayu000/claude-skill-registry -a claude-code
Plugin CommandAlternative
/plugin add https://github.com/majiayu000/claude-skill-registry
Git CloneAlternative
git clone https://github.com/majiayu000/claude-skill-registry.git ~/.claude/skills/cdr3clustering

Copy and paste this command in Claude Code to install this skill

GitHub Repository

majiayu000/claude-skill-registry
Path: skills/data/cdr3clustering
0
FAQ

Frequently asked questions

What is the cdr3clustering skill?

cdr3clustering is a Claude Skill by majiayu000. Skills package instructions and resources that Claude loads on demand, so Claude can perform cdr3clustering-related tasks without extra prompting.

How do I install cdr3clustering?

Use the install commands on this page: add cdr3clustering to Claude Code as a plugin, or clone its repository into your skills directory, then restart Claude so it picks up the skill.

What category does cdr3clustering belong to?

cdr3clustering is in the Other category, tagged ai and data.

Is cdr3clustering free to use?

Yes. cdr3clustering is listed on AIMCP and free to install. It runs inside Claude, so no separate service account is required to use the skill itself.

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