bio-single-cell-cell-annotation
About
This skill provides automated cell type annotation for single-cell RNA-seq data using reference-based methods like CellTypist, scPred, SingleR, and Azimuth. It enables consistent, reproducible cell labeling by leveraging pre-trained or custom models against reference datasets. Developers should use it when they need to automatically classify cell types in their single-cell analysis workflows.
Quick Install
Claude Code
Recommendednpx skills add GPTomics/bioSkills -a claude-code/plugin add https://github.com/GPTomics/bioSkillsgit clone https://github.com/GPTomics/bioSkills.git ~/.claude/skills/bio-single-cell-cell-annotationCopy and paste this command in Claude Code to install this skill
GitHub Repository
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